Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 GPR32P1-201ENST00000601788 811 ntBASIC16.29■□□□□ 0.2
TRIM2Q9C040 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 AL121956.5-201ENST00000625261 221 ntBASIC16.29■□□□□ 0.2
TRIM2Q9C040 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM2Q9C040 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM2Q9C040 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 AC112907.2-201ENST00000448639 330 ntBASIC16.28■□□□□ 0.2
TRIM2Q9C040 AL671277.2-201ENST00000458060 996 ntBASIC16.28■□□□□ 0.2
TRIM2Q9C040 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 SIRPAP1-201ENST00000448467 1770 ntBASIC16.28■□□□□ 0.2
TRIM2Q9C040 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM2Q9C040 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM2Q9C040 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 UPK3BP1-201ENST00000428678 509 ntBASIC16.27■□□□□ 0.2
TRIM2Q9C040 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM2Q9C040 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM2Q9C040 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRIM2Q9C040 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM2Q9C040 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.27■□□□□ 0.19
TRIM2Q9C040 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRIM2Q9C040 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 LTB4R2-202ENST00000528054 3092 ntBASIC16.27■□□□□ 0.19
TRIM2Q9C040 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM2Q9C040 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM2Q9C040 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms