Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AL391807.1-203ENST00000604392 2365 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC011676.5-201ENST00000624864 2660 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 TSPY12P-201ENST00000421279 868 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC005104.2-201ENST00000427818 678 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 KRT18P48-201ENST00000434763 852 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC112698.1-201ENST00000510299 916 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC004263.2-201ENST00000617183 678 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 AL138966.2-201ENST00000621997 464 ntBASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHANK2-AS3Q9BTD1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC140113.3-201ENST00000605663 199 ntBASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHANK2-AS3Q9BTD1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms