Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ESPNP-201ENST00000270691 2015 ntBASIC12.33□□□□□ -0.44
UPK3BQ9BT76 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 AC126763.1-201ENST00000552015 2118 ntBASIC12.32□□□□□ -0.44
UPK3BQ9BT76 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 FOSL1P1-201ENST00000511041 816 ntBASIC12.32□□□□□ -0.44
UPK3BQ9BT76 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 AC009533.2-201ENST00000543664 586 ntBASIC12.32□□□□□ -0.44
UPK3BQ9BT76 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 AP005901.3-202ENST00000581653 237 ntBASIC12.32□□□□□ -0.44
UPK3BQ9BT76 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UPK3BQ9BT76 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 AC093010.1-201ENST00000473625 1624 ntBASIC12.31□□□□□ -0.44
UPK3BQ9BT76 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 AC138894.3-201ENST00000603787 634 ntBASIC12.31□□□□□ -0.44
UPK3BQ9BT76 IFNL4P1-201ENST00000607083 540 ntBASIC12.31□□□□□ -0.44
UPK3BQ9BT76 AC114341.1-201ENST00000618070 349 ntBASIC12.31□□□□□ -0.44
UPK3BQ9BT76 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms