Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
YIPF4Q9BSR8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
YIPF4Q9BSR8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF4Q9BSR8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
YIPF4Q9BSR8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC112698.1-201ENST00000510299 916 ntBASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC116407.2-201ENST00000613639 860 ntBASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC009154.2-201ENST00000621177 724 ntBASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AL121956.5-201ENST00000625261 221 ntBASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AC141586.5-201ENST00000624546 2050 ntBASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF4Q9BSR8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 IER3-202ENST00000376377 1350 ntBASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 PCED1CP-201ENST00000419887 785 ntBASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 KRT18P56-201ENST00000507275 550 ntBASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 AC093458.2-201ENST00000623150 629 ntBASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF4Q9BSR8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.64■□□□□ 0.26
YIPF4Q9BSR8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
YIPF4Q9BSR8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 AL390719.2-201ENST00000606993 987 ntBASIC16.64■□□□□ 0.25
YIPF4Q9BSR8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms