Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SPENQ96T58 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 REXO1L9P-201ENST00000604264 2108 ntBASIC15.79■□□□□ 0.12
SPENQ96T58 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.79■□□□□ 0.12
SPENQ96T58 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.79■□□□□ 0.12
SPENQ96T58 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
SPENQ96T58 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SPENQ96T58 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SPENQ96T58 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.79■□□□□ 0.12
SPENQ96T58 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SPENQ96T58 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.79■□□□□ 0.12
SPENQ96T58 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.79■□□□□ 0.12
SPENQ96T58 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 AC005225.4-201ENST00000557330 545 ntBASIC15.79■□□□□ 0.12
SPENQ96T58 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 AC008667.4-201ENST00000607370 168 ntBASIC15.79■□□□□ 0.12
SPENQ96T58 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SPENQ96T58 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPENQ96T58 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.79■□□□□ 0.12
SPENQ96T58 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.78■□□□□ 0.12
SPENQ96T58 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.78■□□□□ 0.12
SPENQ96T58 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
SPENQ96T58 CRYGEP-201ENST00000412192 528 ntBASIC15.78■□□□□ 0.12
SPENQ96T58 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.78■□□□□ 0.12
SPENQ96T58 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 AL121761.2-201ENST00000598007 1648 ntBASIC15.78■□□□□ 0.12
SPENQ96T58 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.78■□□□□ 0.12
SPENQ96T58 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPENQ96T58 MRPL20P1-201ENST00000400819 433 ntBASIC15.78■□□□□ 0.12
SPENQ96T58 AC092474.2-201ENST00000424288 719 ntBASIC15.78■□□□□ 0.12
SPENQ96T58 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.78■□□□□ 0.12
SPENQ96T58 AC096734.2-201ENST00000562054 433 ntBASIC15.78■□□□□ 0.12
SPENQ96T58 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.78■□□□□ 0.12
SPENQ96T58 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.78■□□□□ 0.12
SPENQ96T58 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.78■□□□□ 0.12
SPENQ96T58 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.77■□□□□ 0.12
SPENQ96T58 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SPENQ96T58 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SPENQ96T58 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.77■□□□□ 0.12
SPENQ96T58 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.77■□□□□ 0.12
SPENQ96T58 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 GPS2P2-201ENST00000430745 888 ntBASIC15.77■□□□□ 0.12
SPENQ96T58 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.77■□□□□ 0.12
SPENQ96T58 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.77■□□□□ 0.12
SPENQ96T58 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.77■□□□□ 0.12
SPENQ96T58 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPENQ96T58 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.77■□□□□ 0.12
SPENQ96T58 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.77■□□□□ 0.11
SPENQ96T58 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.77■□□□□ 0.11
SPENQ96T58 PGM5P2-202ENST00000637225 1043 ntBASIC15.77■□□□□ 0.11
SPENQ96T58 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.77■□□□□ 0.11
SPENQ96T58 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms