Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 AC010460.3-201ENST00000511359 1579 ntBASIC14.83□□□□□ -0.04
TIMD4Q96H15 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 FGFR3P6-201ENST00000457012 610 ntBASIC14.83□□□□□ -0.04
TIMD4Q96H15 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 SLC25A6P4-201ENST00000586535 553 ntBASIC14.83□□□□□ -0.04
TIMD4Q96H15 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TIMD4Q96H15 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TIMD4Q96H15 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 IGHV3-52-201ENST00000519770 353 ntBASIC14.82□□□□□ -0.04
TIMD4Q96H15 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 TP73-AS1-207ENST00000624167 988 ntBASIC14.82□□□□□ -0.04
TIMD4Q96H15 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.82□□□□□ -0.04
TIMD4Q96H15 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TIMD4Q96H15 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
TIMD4Q96H15 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 MRPL3P1-201ENST00000400109 1033 ntBASIC14.81□□□□□ -0.04
TIMD4Q96H15 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 RNPS1P1-201ENST00000507437 918 ntBASIC14.81□□□□□ -0.04
TIMD4Q96H15 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMD4Q96H15 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TIMD4Q96H15 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms