Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 ABCD1P5-201ENST00000445663 754 ntBASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AL591684.3-201ENST00000605187 298 ntBASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.34■□□□□ 0.21
CTHRC1Q96CG8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTHRC1Q96CG8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CTHRC1Q96CG8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTHRC1Q96CG8 AC141586.5-201ENST00000624546 2050 ntBASIC16.33■□□□□ 0.21
CTHRC1Q96CG8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.33■□□□□ 0.21
CTHRC1Q96CG8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 CLEC4GP1-201ENST00000596555 870 ntBASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AL121772.3-201ENST00000610840 674 ntBASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AC139713.2-201ENST00000641328 2723 ntBASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AC016396.2-201ENST00000562575 1417 ntBASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 AL645608.8-201ENST00000606034 2086 ntBASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTHRC1Q96CG8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTHRC1Q96CG8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms