Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 AL445647.1-201ENST00000606221 3599 ntBASIC10.98□□□□□ -0.65
SVIPQ8NHG7 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 VIT-201ENST00000379241 2525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 AL731571.1-201ENST00000617058 5428 ntBASIC10.98□□□□□ -0.65
SVIPQ8NHG7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 AP001094.4-201ENST00000579008 2176 ntBASIC10.97□□□□□ -0.65
SVIPQ8NHG7 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 AC114271.1-201ENST00000612689 2813 ntBASIC10.97□□□□□ -0.65
SVIPQ8NHG7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 BNIP3P1-202ENST00000550043 1585 ntBASIC10.97□□□□□ -0.65
SVIPQ8NHG7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 TXNL4B-202ENST00000423037 2490 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 AL035252.3-201ENST00000613361 2784 ntBASIC10.97□□□□□ -0.65
SVIPQ8NHG7 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SVIPQ8NHG7 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 UGT1A6-201ENST00000305139 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 UGT1A9-201ENST00000354728 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.96□□□□□ -0.65
SVIPQ8NHG7 LMOD3-202ENST00000475434 2238 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 NT5C3AP1-202ENST00000441170 1663 ntBASIC10.96□□□□□ -0.65
SVIPQ8NHG7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.96□□□□□ -0.65
SVIPQ8NHG7 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
SVIPQ8NHG7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms