Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 AP002383.4-201ENST00000442518 975 ntBASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 AP000550.4-202ENST00000639755 178 ntBASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 BX276092.5-203ENST00000456199 560 ntBASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 AC022898.2-201ENST00000616822 1312 ntBASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.67■□□□□ 0.26
SIMC1Q8NDZ2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 AL355312.1-201ENST00000407115 2176 ntBASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 AC091076.1-201ENST00000610741 619 ntBASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 IGHV3-41-201ENST00000613121 348 ntBASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIMC1Q8NDZ2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms