Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 IGLL3P-201ENST00000412472 434 ntBASIC18.05■□□□□ 0.48
SIX5Q8N196 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SIX5Q8N196 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.05■□□□□ 0.48
SIX5Q8N196 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.05■□□□□ 0.48
SIX5Q8N196 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 NCF1C-201ENST00000438382 1427 ntBASIC18.05■□□□□ 0.48
SIX5Q8N196 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIX5Q8N196 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SIX5Q8N196 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SIX5Q8N196 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.04■□□□□ 0.48
SIX5Q8N196 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 AL049812.1-201ENST00000432563 2267 ntBASIC18.04■□□□□ 0.48
SIX5Q8N196 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.04■□□□□ 0.48
SIX5Q8N196 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 AC103564.2-201ENST00000432853 1299 ntBASIC18.04■□□□□ 0.48
SIX5Q8N196 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SIX5Q8N196 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SIX5Q8N196 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.04■□□□□ 0.48
SIX5Q8N196 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.04■□□□□ 0.48
SIX5Q8N196 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.04■□□□□ 0.48
SIX5Q8N196 AFG3L1P-217ENST00000557444 2447 ntBASIC18.04■□□□□ 0.48
SIX5Q8N196 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 AC090340.1-201ENST00000620778 4980 ntBASIC18.04■□□□□ 0.48
SIX5Q8N196 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIX5Q8N196 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SIX5Q8N196 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
SIX5Q8N196 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.03■□□□□ 0.48
SIX5Q8N196 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX5Q8N196 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX5Q8N196 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.03■□□□□ 0.48
SIX5Q8N196 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.03■□□□□ 0.48
SIX5Q8N196 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX5Q8N196 ACTG1P14-201ENST00000446382 1122 ntBASIC18.03■□□□□ 0.48
SIX5Q8N196 KRT19P2-202ENST00000557173 1012 ntBASIC18.03■□□□□ 0.48
SIX5Q8N196 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.03■□□□□ 0.48
SIX5Q8N196 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.03■□□□□ 0.48
SIX5Q8N196 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.03■□□□□ 0.48
SIX5Q8N196 AC004835.2-201ENST00000603762 682 ntBASIC18.03■□□□□ 0.48
SIX5Q8N196 AC010654.1-201ENST00000615722 808 ntBASIC18.03■□□□□ 0.48
SIX5Q8N196 AC010507.1-201ENST00000633895 436 ntBASIC18.03■□□□□ 0.48
SIX5Q8N196 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.03■□□□□ 0.48
SIX5Q8N196 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SIX5Q8N196 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIX5Q8N196 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIX5Q8N196 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SIX5Q8N196 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.02■□□□□ 0.48
SIX5Q8N196 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms