Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 OR6D1P-202ENST00000641007 5290 ntBASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AC073592.4-201ENST00000623827 446 ntBASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AL022326.1-202ENST00000641533 845 ntBASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AC112698.1-201ENST00000510299 916 ntBASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 ELL2P1-201ENST00000413990 1906 ntBASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RP1L1Q8IWN7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 MYLKP1-201ENST00000509077 1580 ntBASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RP1L1Q8IWN7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RP1L1Q8IWN7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RP1L1Q8IWN7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms