Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 MED15P5-201ENST00000423150 992 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 KRT18P27-201ENST00000427733 1299 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 PGAM5P1-201ENST00000518923 814 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 AC092865.5-201ENST00000545435 363 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 AC109462.3-201ENST00000573934 613 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 AL356488.2-201ENST00000602755 427 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.66■□□□□ 0.74
TRIM50Q86XT4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM50Q86XT4 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 AC027601.4-201ENST00000611259 610 ntBASIC19.65■□□□□ 0.74
TRIM50Q86XT4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 AC139530.3-201ENST00000620344 690 ntBASIC19.65■□□□□ 0.74
TRIM50Q86XT4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM50Q86XT4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRIM50Q86XT4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM50Q86XT4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM50Q86XT4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM50Q86XT4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 KLF4P1-201ENST00000412782 1185 ntBASIC19.64■□□□□ 0.73
TRIM50Q86XT4 AL020989.1-201ENST00000422979 469 ntBASIC19.64■□□□□ 0.73
TRIM50Q86XT4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms