Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 FAM201B-201ENST00000458407 597 ntBASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.32□□□□□ -0.12
TMEM88Q6PEY1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 NORAD-201ENST00000565493 5339 ntBASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM88Q6PEY1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 AL513523.2-202ENST00000427283 2040 ntBASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
TMEM88Q6PEY1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms