Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC074051.2-201ENST00000565115 352 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 AC005336.2-201ENST00000593183 939 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 AL671883.3-201ENST00000603274 991 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 LINC00602-201ENST00000629776 2065 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RNF43Q68DV7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF43Q68DV7 AC132938.6-201ENST00000623828 1655 ntBASIC18.54■□□□□ 0.56
RNF43Q68DV7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 PMS2P1-201ENST00000431037 1228 ntBASIC18.53■□□□□ 0.56
RNF43Q68DV7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 VENTXP7-201ENST00000475503 772 ntBASIC18.53■□□□□ 0.56
RNF43Q68DV7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 AC011840.4-201ENST00000578471 627 ntBASIC18.53■□□□□ 0.56
RNF43Q68DV7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 AC080080.1-201ENST00000625121 2420 ntBASIC18.53■□□□□ 0.56
RNF43Q68DV7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF43Q68DV7 AC138932.1-201ENST00000534164 6830 ntBASIC18.53■□□□□ 0.56
RNF43Q68DV7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF43Q68DV7 AC084018.2-201ENST00000613093 2607 ntBASIC18.53■□□□□ 0.56
RNF43Q68DV7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 BNIP3P18-201ENST00000593976 575 ntBASIC18.52■□□□□ 0.56
RNF43Q68DV7 AC138894.3-201ENST00000603787 634 ntBASIC18.52■□□□□ 0.56
RNF43Q68DV7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF43Q68DV7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF43Q68DV7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF43Q68DV7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF43Q68DV7 AC093010.1-201ENST00000473625 1624 ntBASIC18.52■□□□□ 0.55
RNF43Q68DV7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF43Q68DV7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF43Q68DV7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF43Q68DV7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF43Q68DV7 HLA-A-201ENST00000376802 1334 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms