Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 DDX43P3-201ENST00000441064 443 ntBASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC091607.1-201ENST00000490318 1060 ntBASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC125634.1-201ENST00000438758 1403 ntBASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQA1Q5Y7H0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC097374.2-201ENST00000618617 1306 ntBASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC096582.2-201ENST00000510860 516 ntBASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 AP005901.3-202ENST00000581653 237 ntBASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC005336.2-201ENST00000593183 939 ntBASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC009949.1-201ENST00000623048 1830 ntBASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQA1Q5Y7H0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 POM121L3P-201ENST00000419331 1163 ntBASIC16.48■□□□□ 0.23
HLA-DQA1Q5Y7H0 AC096633.1-201ENST00000422446 749 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms