Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.09■□□□□ 0.97
PDS5AQ29RF7 KRT18P3-201ENST00000451602 1288 ntBASIC21.09■□□□□ 0.97
PDS5AQ29RF7 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.09■□□□□ 0.97
PDS5AQ29RF7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 AL139327.4-201ENST00000612362 153 ntBASIC21.09■□□□□ 0.97
PDS5AQ29RF7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 AP002414.1-201ENST00000391405 1147 ntBASIC21.08■□□□□ 0.97
PDS5AQ29RF7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 AC108073.2-201ENST00000464002 357 ntBASIC21.08■□□□□ 0.97
PDS5AQ29RF7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.08■□□□□ 0.97
PDS5AQ29RF7 NEFHP1-201ENST00000412845 2629 ntBASIC21.08■□□□□ 0.96
PDS5AQ29RF7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDS5AQ29RF7 AC046185.3-201ENST00000623228 1824 ntBASIC21.08■□□□□ 0.96
PDS5AQ29RF7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.08■□□□□ 0.96
PDS5AQ29RF7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.07■□□□□ 0.96
PDS5AQ29RF7 PRSS29P-201ENST00000440800 595 ntBASIC21.07■□□□□ 0.96
PDS5AQ29RF7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDS5AQ29RF7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 KRT18P13-201ENST00000400056 1290 ntBASIC21.06■□□□□ 0.96
PDS5AQ29RF7 BX842568.4-201ENST00000421222 227 ntBASIC21.06■□□□□ 0.96
PDS5AQ29RF7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 RNA5SP416-201ENST00000516838 111 ntBASIC21.06■□□□□ 0.96
PDS5AQ29RF7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.06■□□□□ 0.96
PDS5AQ29RF7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms