Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL20P78556 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 GPAT2P1-201ENST00000444924 1672 ntBASIC13.94□□□□□ -0.18
CCL20P78556 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL20P78556 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL20P78556 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 AC092364.2-201ENST00000596710 2692 ntBASIC13.93□□□□□ -0.18
CCL20P78556 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 AC016396.2-201ENST00000562575 1417 ntBASIC13.93□□□□□ -0.18
CCL20P78556 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL20P78556 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL20P78556 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.93□□□□□ -0.18
CCL20P78556 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
CCL20P78556 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCL20P78556 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCL20P78556 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCL20P78556 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CCL20P78556 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
CCL20P78556 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CCL20P78556 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL20P78556 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL20P78556 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 AL023284.2-201ENST00000405850 579 ntBASIC13.92□□□□□ -0.18
CCL20P78556 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.92□□□□□ -0.18
CCL20P78556 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.92□□□□□ -0.18
CCL20P78556 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 AC091390.4-202ENST00000476426 537 ntBASIC13.92□□□□□ -0.18
CCL20P78556 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.92□□□□□ -0.18
CCL20P78556 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 PNMA6B-201ENST00000538162 1200 ntBASIC13.92□□□□□ -0.18
CCL20P78556 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.92□□□□□ -0.18
CCL20P78556 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 HLA-B-256ENST00000639848 1089 ntBASIC13.92□□□□□ -0.18
CCL20P78556 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCL20P78556 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCL20P78556 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.92□□□□□ -0.18
CCL20P78556 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms