Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 AL121672.3-201ENST00000608644 468 ntBASIC15.45■□□□□ 0.06
HIST1H3AP68431 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 AL023806.1-201ENST00000603994 1649 ntBASIC15.45■□□□□ 0.06
HIST1H3AP68431 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 AC016734.2-201ENST00000624325 1377 ntBASIC15.45■□□□□ 0.06
HIST1H3AP68431 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H3AP68431 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HIST1H3AP68431 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 HTR7P1-202ENST00000624664 4411 ntBASIC15.44■□□□□ 0.06
HIST1H3AP68431 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 CHCHD2P8-201ENST00000429873 447 ntBASIC15.44■□□□□ 0.06
HIST1H3AP68431 BX276092.5-203ENST00000456199 560 ntBASIC15.44■□□□□ 0.06
HIST1H3AP68431 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 AC011840.4-201ENST00000578471 627 ntBASIC15.44■□□□□ 0.06
HIST1H3AP68431 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H3AP68431 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HIST1H3AP68431 AC108860.2-201ENST00000562760 2183 ntBASIC15.43■□□□□ 0.06
HIST1H3AP68431 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 PKD1P1-201ENST00000458669 6805 ntBASIC15.43■□□□□ 0.06
HIST1H3AP68431 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 AC122714.2-201ENST00000502787 707 ntBASIC15.43■□□□□ 0.06
HIST1H3AP68431 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H3AP68431 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST1H3AP68431 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms