Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.67■□□□□ 0.26
TRA2BP62995 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRA2BP62995 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.67■□□□□ 0.26
TRA2BP62995 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.67■□□□□ 0.26
TRA2BP62995 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRA2BP62995 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRA2BP62995 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRA2BP62995 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.66■□□□□ 0.26
TRA2BP62995 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRA2BP62995 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRA2BP62995 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRA2BP62995 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.66■□□□□ 0.26
TRA2BP62995 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRA2BP62995 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 AP002383.4-201ENST00000442518 975 ntBASIC16.66■□□□□ 0.26
TRA2BP62995 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.66■□□□□ 0.26
TRA2BP62995 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.66■□□□□ 0.26
TRA2BP62995 TPSP2-201ENST00000561760 610 ntBASIC16.66■□□□□ 0.26
TRA2BP62995 AC111152.3-201ENST00000569699 673 ntBASIC16.66■□□□□ 0.26
TRA2BP62995 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.66■□□□□ 0.26
TRA2BP62995 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRA2BP62995 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRA2BP62995 AC011467.2-201ENST00000598425 242 ntBASIC16.66■□□□□ 0.26
TRA2BP62995 AC091076.1-201ENST00000610741 619 ntBASIC16.66■□□□□ 0.26
TRA2BP62995 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.66■□□□□ 0.26
TRA2BP62995 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
TRA2BP62995 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.66■□□□□ 0.26
TRA2BP62995 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 AC139713.2-201ENST00000641328 2723 ntBASIC16.66■□□□□ 0.26
TRA2BP62995 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.66■□□□□ 0.26
TRA2BP62995 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRA2BP62995 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
TRA2BP62995 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.65■□□□□ 0.26
TRA2BP62995 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.65■□□□□ 0.26
TRA2BP62995 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRA2BP62995 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.65■□□□□ 0.26
TRA2BP62995 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.65■□□□□ 0.26
TRA2BP62995 KRT18P35-201ENST00000510488 1269 ntBASIC16.65■□□□□ 0.26
TRA2BP62995 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.65■□□□□ 0.26
TRA2BP62995 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.65■□□□□ 0.26
TRA2BP62995 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRA2BP62995 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRA2BP62995 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.65■□□□□ 0.26
TRA2BP62995 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 CROCCP2-202ENST00000412962 2773 ntBASIC16.65■□□□□ 0.26
TRA2BP62995 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRA2BP62995 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRA2BP62995 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRA2BP62995 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRA2BP62995 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRA2BP62995 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms