Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D3P61077 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBE2D3P61077 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D3P61077 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.63□□□□□ -0.39
UBE2D3P61077 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.63□□□□□ -0.39
UBE2D3P61077 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.63□□□□□ -0.39
UBE2D3P61077 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D3P61077 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D3P61077 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBE2D3P61077 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2D3P61077 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2D3P61077 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2D3P61077 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2D3P61077 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
UBE2D3P61077 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2D3P61077 AL157888.1-201ENST00000631930 593 ntBASIC12.62□□□□□ -0.39
UBE2D3P61077 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
UBE2D3P61077 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
UBE2D3P61077 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2D3P61077 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D3P61077 PCDHB19P-201ENST00000570871 2371 ntBASIC12.62□□□□□ -0.39
UBE2D3P61077 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
UBE2D3P61077 AC100803.2-201ENST00000562459 1963 ntBASIC12.61□□□□□ -0.39
UBE2D3P61077 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2D3P61077 UBALD1-205ENST00000590891 2641 ntBASIC12.61□□□□□ -0.39
UBE2D3P61077 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 LINC01568-207ENST00000641790 1380 ntBASIC12.61□□□□□ -0.39
UBE2D3P61077 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 AC113404.2-201ENST00000507884 177 ntBASIC12.61□□□□□ -0.39
UBE2D3P61077 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2D3P61077 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 KRT18P22-201ENST00000402024 1347 ntBASIC12.61□□□□□ -0.39
UBE2D3P61077 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D3P61077 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2D3P61077 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2D3P61077 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D3P61077 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D3P61077 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms