Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 TSPY23P-201ENST00000440136 739 ntBASIC13.82□□□□□ -0.2
FAM3BP58499 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM3BP58499 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.82□□□□□ -0.2
FAM3BP58499 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.82□□□□□ -0.2
FAM3BP58499 AC110285.5-201ENST00000611501 352 ntBASIC13.82□□□□□ -0.2
FAM3BP58499 AL121829.2-201ENST00000620908 328 ntBASIC13.82□□□□□ -0.2
FAM3BP58499 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
FAM3BP58499 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
FAM3BP58499 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FAM3BP58499 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.82□□□□□ -0.2
FAM3BP58499 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.81□□□□□ -0.2
FAM3BP58499 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 YBX1P10-201ENST00000444752 975 ntBASIC13.81□□□□□ -0.2
FAM3BP58499 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.81□□□□□ -0.2
FAM3BP58499 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.81□□□□□ -0.2
FAM3BP58499 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FAM3BP58499 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.81□□□□□ -0.2
FAM3BP58499 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FAM3BP58499 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 AP006587.1-201ENST00000534129 1502 ntBASIC13.8□□□□□ -0.2
FAM3BP58499 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM3BP58499 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FAM3BP58499 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.8□□□□□ -0.2
FAM3BP58499 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM3BP58499 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
FAM3BP58499 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 MIR4497-201ENST00000583208 89 ntBASIC13.8□□□□□ -0.2
FAM3BP58499 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM3BP58499 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.8□□□□□ -0.2
FAM3BP58499 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.8□□□□□ -0.2
FAM3BP58499 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms