Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CMC4P56277 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 INTS4P1-201ENST00000438455 1935 ntBASIC13.17□□□□□ -0.3
CMC4P56277 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.17□□□□□ -0.3
CMC4P56277 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CMC4P56277 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CMC4P56277 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CMC4P56277 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 RCN1P2-201ENST00000398357 915 ntBASIC13.16□□□□□ -0.3
CMC4P56277 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.16□□□□□ -0.3
CMC4P56277 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 KRT18P31-201ENST00000506277 1292 ntBASIC13.16□□□□□ -0.3
CMC4P56277 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.16□□□□□ -0.3
CMC4P56277 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.16□□□□□ -0.3
CMC4P56277 AP005901.3-202ENST00000581653 237 ntBASIC13.16□□□□□ -0.3
CMC4P56277 CLEC4GP1-201ENST00000596555 870 ntBASIC13.16□□□□□ -0.3
CMC4P56277 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 AC138894.3-201ENST00000603787 634 ntBASIC13.16□□□□□ -0.3
CMC4P56277 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.16□□□□□ -0.3
CMC4P56277 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.16□□□□□ -0.3
CMC4P56277 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CMC4P56277 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CMC4P56277 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 RBM17P3-201ENST00000417687 1192 ntBASIC13.15□□□□□ -0.3
CMC4P56277 AC005104.2-201ENST00000427818 678 ntBASIC13.15□□□□□ -0.3
CMC4P56277 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.15□□□□□ -0.3
CMC4P56277 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.15□□□□□ -0.3
CMC4P56277 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CMC4P56277 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CMC4P56277 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CMC4P56277 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms