Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.81■■□□□ 1.08
NUP98P52948 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NUP98P52948 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.81■■□□□ 1.08
NUP98P52948 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.81■■□□□ 1.08
NUP98P52948 FAM58CP-201ENST00000435741 640 ntBASIC21.81■■□□□ 1.08
NUP98P52948 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NUP98P52948 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.81■■□□□ 1.08
NUP98P52948 AC023141.13-201ENST00000604991 943 ntBASIC21.81■■□□□ 1.08
NUP98P52948 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NUP98P52948 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
NUP98P52948 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NUP98P52948 AC009113.1-201ENST00000570267 2443 ntBASIC21.81■■□□□ 1.08
NUP98P52948 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NUP98P52948 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.81■■□□□ 1.08
NUP98P52948 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUP98P52948 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
NUP98P52948 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NUP98P52948 CEND1P1-201ENST00000451006 455 ntBASIC21.8■■□□□ 1.08
NUP98P52948 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.8■■□□□ 1.08
NUP98P52948 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.8■■□□□ 1.08
NUP98P52948 AC096734.2-201ENST00000562054 433 ntBASIC21.8■■□□□ 1.08
NUP98P52948 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.8■■□□□ 1.08
NUP98P52948 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NUP98P52948 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NUP98P52948 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.8■■□□□ 1.08
NUP98P52948 AC079781.4-201ENST00000641908 219 ntBASIC21.8■■□□□ 1.08
NUP98P52948 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.8■■□□□ 1.08
NUP98P52948 AC046185.3-201ENST00000623228 1824 ntBASIC21.8■■□□□ 1.08
NUP98P52948 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.8■■□□□ 1.08
NUP98P52948 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.8■■□□□ 1.08
NUP98P52948 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.8■■□□□ 1.08
NUP98P52948 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NUP98P52948 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NUP98P52948 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NUP98P52948 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
NUP98P52948 AL513480.1-201ENST00000451731 511 ntBASIC21.8■■□□□ 1.08
NUP98P52948 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.8■■□□□ 1.08
NUP98P52948 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.8■■□□□ 1.08
NUP98P52948 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.8■■□□□ 1.08
NUP98P52948 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP98P52948 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.79■■□□□ 1.08
NUP98P52948 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.79■■□□□ 1.08
NUP98P52948 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NUP98P52948 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NUP98P52948 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.79■■□□□ 1.08
NUP98P52948 CXCL1P1-201ENST00000502804 216 ntBASIC21.79■■□□□ 1.08
NUP98P52948 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.79■■□□□ 1.08
NUP98P52948 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.79■■□□□ 1.08
NUP98P52948 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
NUP98P52948 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.79■■□□□ 1.08
NUP98P52948 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.79■■□□□ 1.08
NUP98P52948 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NUP98P52948 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
NUP98P52948 AC006116.8-202ENST00000587620 1550 ntBASIC21.79■■□□□ 1.08
NUP98P52948 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NUP98P52948 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP98P52948 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUP98P52948 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NUP98P52948 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP98P52948 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.78■■□□□ 1.08
NUP98P52948 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP98P52948 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.78■■□□□ 1.08
NUP98P52948 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
NUP98P52948 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.78■■□□□ 1.08
NUP98P52948 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.78■■□□□ 1.08
NUP98P52948 SLC25A6P2-201ENST00000497974 877 ntBASIC21.78■■□□□ 1.08
NUP98P52948 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP98P52948 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms