Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PDX1P52945 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
PDX1P52945 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
PDX1P52945 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDX1P52945 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PDX1P52945 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PDX1P52945 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.15■□□□□ 0.34
PDX1P52945 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PDX1P52945 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.15■□□□□ 0.34
PDX1P52945 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.15■□□□□ 0.34
PDX1P52945 RNA5SP415-201ENST00000517246 115 ntBASIC17.15■□□□□ 0.34
PDX1P52945 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.15■□□□□ 0.34
PDX1P52945 NKAPP1-205ENST00000585790 367 ntBASIC17.15■□□□□ 0.34
PDX1P52945 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PDX1P52945 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 Z83851.2-201ENST00000609564 659 ntBASIC17.15■□□□□ 0.34
PDX1P52945 FAM197Y3-203ENST00000618346 717 ntBASIC17.15■□□□□ 0.34
PDX1P52945 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
PDX1P52945 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.15■□□□□ 0.34
PDX1P52945 AP000867.4-201ENST00000641616 219 ntBASIC17.15■□□□□ 0.34
PDX1P52945 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 AC132938.6-201ENST00000623828 1655 ntBASIC17.15■□□□□ 0.34
PDX1P52945 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PDX1P52945 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.15■□□□□ 0.34
PDX1P52945 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.15■□□□□ 0.34
PDX1P52945 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDX1P52945 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PDX1P52945 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PDX1P52945 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.14■□□□□ 0.33
PDX1P52945 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.14■□□□□ 0.33
PDX1P52945 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PDX1P52945 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 FAM220CP-201ENST00000395253 831 ntBASIC17.14■□□□□ 0.33
PDX1P52945 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.14■□□□□ 0.33
PDX1P52945 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.14■□□□□ 0.33
PDX1P52945 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.14■□□□□ 0.33
PDX1P52945 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.14■□□□□ 0.33
PDX1P52945 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.14■□□□□ 0.33
PDX1P52945 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.14■□□□□ 0.33
PDX1P52945 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.14■□□□□ 0.33
PDX1P52945 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.14■□□□□ 0.33
PDX1P52945 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.14■□□□□ 0.33
PDX1P52945 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.14■□□□□ 0.33
PDX1P52945 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.14■□□□□ 0.33
PDX1P52945 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.14■□□□□ 0.33
PDX1P52945 AC107918.4-202ENST00000641623 219 ntBASIC17.14■□□□□ 0.33
PDX1P52945 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.14■□□□□ 0.33
PDX1P52945 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDX1P52945 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDX1P52945 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
PDX1P52945 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDX1P52945 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
PDX1P52945 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDX1P52945 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PDX1P52945 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDX1P52945 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDX1P52945 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDX1P52945 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDX1P52945 AC005104.2-201ENST00000427818 678 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms