Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.63■□□□□ 0.89
MRE11P49959 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.63■□□□□ 0.89
MRE11P49959 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRE11P49959 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 KRT8P3-201ENST00000519669 1449 ntBASIC20.62■□□□□ 0.89
MRE11P49959 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
MRE11P49959 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.62■□□□□ 0.89
MRE11P49959 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.62■□□□□ 0.89
MRE11P49959 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.62■□□□□ 0.89
MRE11P49959 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.62■□□□□ 0.89
MRE11P49959 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.62■□□□□ 0.89
MRE11P49959 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MRE11P49959 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRE11P49959 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.62■□□□□ 0.89
MRE11P49959 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.61■□□□□ 0.89
MRE11P49959 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 UNC93B2-201ENST00000285383 730 ntBASIC20.61■□□□□ 0.89
MRE11P49959 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.61■□□□□ 0.89
MRE11P49959 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.61■□□□□ 0.89
MRE11P49959 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.61■□□□□ 0.89
MRE11P49959 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
MRE11P49959 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.61■□□□□ 0.89
MRE11P49959 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRE11P49959 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.6■□□□□ 0.89
MRE11P49959 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MRE11P49959 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.6■□□□□ 0.89
MRE11P49959 LINC01238-205ENST00000567549 1107 ntBASIC20.6■□□□□ 0.89
MRE11P49959 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MRE11P49959 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.6■□□□□ 0.89
MRE11P49959 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms