Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC1A1P43005 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC1A1P43005 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC1A1P43005 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLC1A1P43005 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A1P43005 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC1A1P43005 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLC1A1P43005 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC1A1P43005 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A1P43005 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A1P43005 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A1P43005 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 KRT18P57-201ENST00000443599 1254 ntBASIC18.5■□□□□ 0.55
SLC1A1P43005 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.5■□□□□ 0.55
SLC1A1P43005 AC092647.4-201ENST00000457211 535 ntBASIC18.5■□□□□ 0.55
SLC1A1P43005 AC002558.1-201ENST00000488906 803 ntBASIC18.5■□□□□ 0.55
SLC1A1P43005 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 VENTXP5-201ENST00000523979 775 ntBASIC18.5■□□□□ 0.55
SLC1A1P43005 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A1P43005 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC1A1P43005 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A1P43005 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 AL139327.4-201ENST00000612362 153 ntBASIC18.5■□□□□ 0.55
SLC1A1P43005 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC1A1P43005 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC1A1P43005 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
SLC1A1P43005 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC1A1P43005 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC1A1P43005 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC1A1P43005 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SLC1A1P43005 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLC1A1P43005 Z83836.1-201ENST00000624605 1642 ntBASIC18.49■□□□□ 0.55
SLC1A1P43005 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A1P43005 AC012313.1-201ENST00000593393 3059 ntBASIC18.49■□□□□ 0.55
SLC1A1P43005 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A1P43005 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC1A1P43005 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC1A1P43005 COX5BP2-201ENST00000392354 334 ntBASIC18.49■□□□□ 0.55
SLC1A1P43005 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC1A1P43005 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A1P43005 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A1P43005 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SLC1A1P43005 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLC1A1P43005 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLC1A1P43005 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC1A1P43005 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC1A1P43005 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC1A1P43005 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC1A1P43005 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 AC211429.1-201ENST00000415277 523 ntBASIC18.48■□□□□ 0.55
SLC1A1P43005 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC1A1P43005 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC1A1P43005 RNF126P1-202ENST00000569893 925 ntBASIC18.48■□□□□ 0.55
SLC1A1P43005 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC1A1P43005 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC1A1P43005 LINC01023-201ENST00000606054 436 ntBASIC18.48■□□□□ 0.55
SLC1A1P43005 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 PCDHA12-202ENST00000613593 2588 ntBASIC18.48■□□□□ 0.55
SLC1A1P43005 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC1A1P43005 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC1A1P43005 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC1A1P43005 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC1A1P43005 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.48■□□□□ 0.55
SLC1A1P43005 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC1A1P43005 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC1A1P43005 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms