Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.35■□□□□ 0.53
SCNN1AP37088 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
SCNN1AP37088 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCNN1AP37088 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCNN1AP37088 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SCNN1AP37088 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SCNN1AP37088 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.34■□□□□ 0.53
SCNN1AP37088 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SCNN1AP37088 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.34■□□□□ 0.53
SCNN1AP37088 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 SIGLEC16-201ENST00000599858 1437 ntBASIC18.34■□□□□ 0.53
SCNN1AP37088 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.34■□□□□ 0.53
SCNN1AP37088 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.34■□□□□ 0.53
SCNN1AP37088 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.34■□□□□ 0.53
SCNN1AP37088 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SCNN1AP37088 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.34■□□□□ 0.53
SCNN1AP37088 KRT18P31-201ENST00000506277 1292 ntBASIC18.34■□□□□ 0.53
SCNN1AP37088 AC106795.1-205ENST00000512851 1056 ntBASIC18.34■□□□□ 0.53
SCNN1AP37088 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 PRELID1P1-202ENST00000567272 903 ntBASIC18.34■□□□□ 0.53
SCNN1AP37088 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.34■□□□□ 0.53
SCNN1AP37088 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.34■□□□□ 0.53
SCNN1AP37088 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.34■□□□□ 0.53
SCNN1AP37088 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.34■□□□□ 0.53
SCNN1AP37088 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCNN1AP37088 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SCNN1AP37088 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
SCNN1AP37088 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCNN1AP37088 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCNN1AP37088 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCNN1AP37088 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCNN1AP37088 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCNN1AP37088 AC046185.3-201ENST00000623228 1824 ntBASIC18.33■□□□□ 0.53
SCNN1AP37088 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCNN1AP37088 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCNN1AP37088 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SCNN1AP37088 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCNN1AP37088 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCNN1AP37088 KLF4P1-201ENST00000412782 1185 ntBASIC18.33■□□□□ 0.52
SCNN1AP37088 STK19B-204ENST00000512515 211 ntBASIC18.33■□□□□ 0.52
SCNN1AP37088 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.33■□□□□ 0.52
SCNN1AP37088 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SCNN1AP37088 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.33■□□□□ 0.52
SCNN1AP37088 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.33■□□□□ 0.52
SCNN1AP37088 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.33■□□□□ 0.52
SCNN1AP37088 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.33■□□□□ 0.52
SCNN1AP37088 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCNN1AP37088 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCNN1AP37088 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.33■□□□□ 0.52
SCNN1AP37088 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCNN1AP37088 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.33■□□□□ 0.52
SCNN1AP37088 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.33■□□□□ 0.52
SCNN1AP37088 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCNN1AP37088 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SCNN1AP37088 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 RBM17P3-201ENST00000417687 1192 ntBASIC18.32■□□□□ 0.52
SCNN1AP37088 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.32■□□□□ 0.52
SCNN1AP37088 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SCNN1AP37088 CLEC4GP1-201ENST00000596555 870 ntBASIC18.32■□□□□ 0.52
SCNN1AP37088 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.32■□□□□ 0.52
SCNN1AP37088 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SCNN1AP37088 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCNN1AP37088 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms