Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC8P31273 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC8P31273 AC025580.3-201ENST00000617932 1424 ntBASIC19.15■□□□□ 0.66
HOXC8P31273 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HOXC8P31273 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HOXC8P31273 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.14■□□□□ 0.66
HOXC8P31273 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.14■□□□□ 0.66
HOXC8P31273 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC8P31273 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC8P31273 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.14■□□□□ 0.65
HOXC8P31273 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC8P31273 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC8P31273 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC8P31273 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC8P31273 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.14■□□□□ 0.65
HOXC8P31273 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC8P31273 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC8P31273 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HOXC8P31273 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.14■□□□□ 0.65
HOXC8P31273 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HOXC8P31273 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC8P31273 PI4KAP1-204ENST00000612579 1703 ntBASIC19.14■□□□□ 0.65
HOXC8P31273 AC138028.4-201ENST00000564984 1845 ntBASIC19.14■□□□□ 0.65
HOXC8P31273 AC046185.3-201ENST00000623228 1824 ntBASIC19.14■□□□□ 0.65
HOXC8P31273 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC8P31273 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HOXC8P31273 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.13■□□□□ 0.65
HOXC8P31273 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 CNN2P11-201ENST00000429351 262 ntBASIC19.13■□□□□ 0.65
HOXC8P31273 AC074386.1-202ENST00000463561 864 ntBASIC19.13■□□□□ 0.65
HOXC8P31273 CXCL1P1-201ENST00000502804 216 ntBASIC19.13■□□□□ 0.65
HOXC8P31273 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.13■□□□□ 0.65
HOXC8P31273 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.13■□□□□ 0.65
HOXC8P31273 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC8P31273 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HOXC8P31273 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC8P31273 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
HOXC8P31273 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HOXC8P31273 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC8P31273 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXC8P31273 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HOXC8P31273 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.12■□□□□ 0.65
HOXC8P31273 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXC8P31273 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 METTL21AP1-201ENST00000438852 635 ntBASIC19.12■□□□□ 0.65
HOXC8P31273 FAM185BP-201ENST00000443595 716 ntBASIC19.12■□□□□ 0.65
HOXC8P31273 ACTG1P14-201ENST00000446382 1122 ntBASIC19.12■□□□□ 0.65
HOXC8P31273 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.12■□□□□ 0.65
HOXC8P31273 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.12■□□□□ 0.65
HOXC8P31273 SNHG9-202ENST00000564014 471 ntBASIC19.12■□□□□ 0.65
HOXC8P31273 AC023141.13-201ENST00000604991 943 ntBASIC19.12■□□□□ 0.65
HOXC8P31273 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HOXC8P31273 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXC8P31273 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXC8P31273 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXC8P31273 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXC8P31273 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC8P31273 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC8P31273 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HOXC8P31273 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC8P31273 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 CEND1P1-201ENST00000451006 455 ntBASIC19.11■□□□□ 0.65
HOXC8P31273 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC8P31273 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXC8P31273 ACTL9-202ENST00000612068 1252 ntBASIC19.11■□□□□ 0.65
HOXC8P31273 AC007064.4-201ENST00000637740 555 ntBASIC19.11■□□□□ 0.65
HOXC8P31273 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
HOXC8P31273 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXC8P31273 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HOXC8P31273 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HOXC8P31273 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC8P31273 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC8P31273 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HOXC8P31273 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC8P31273 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC8P31273 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms