Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
COL11A1P12107 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.92■□□□□ 0.78
COL11A1P12107 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
COL11A1P12107 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL11A1P12107 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 CNN2P11-201ENST00000429351 262 ntBASIC19.91■□□□□ 0.78
COL11A1P12107 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.91■□□□□ 0.78
COL11A1P12107 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.91■□□□□ 0.78
COL11A1P12107 AL031432.2-201ENST00000566714 459 ntBASIC19.91■□□□□ 0.78
COL11A1P12107 AL928711.1-201ENST00000570165 459 ntBASIC19.91■□□□□ 0.78
COL11A1P12107 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.91■□□□□ 0.78
COL11A1P12107 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL11A1P12107 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.91■□□□□ 0.78
COL11A1P12107 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL11A1P12107 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 PTCHD3P3-201ENST00000403073 906 ntBASIC19.9■□□□□ 0.78
COL11A1P12107 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A1P12107 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A1P12107 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL11A1P12107 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A1P12107 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A1P12107 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.9■□□□□ 0.78
COL11A1P12107 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.9■□□□□ 0.78
COL11A1P12107 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.9■□□□□ 0.78
COL11A1P12107 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A1P12107 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.9■□□□□ 0.78
COL11A1P12107 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A1P12107 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.9■□□□□ 0.78
COL11A1P12107 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 MIR4469-201ENST00000583919 79 ntBASIC19.9■□□□□ 0.78
COL11A1P12107 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL11A1P12107 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL11A1P12107 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL11A1P12107 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.9■□□□□ 0.78
COL11A1P12107 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A1P12107 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.89■□□□□ 0.78
COL11A1P12107 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.89■□□□□ 0.78
COL11A1P12107 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A1P12107 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.89■□□□□ 0.78
COL11A1P12107 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL11A1P12107 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.89■□□□□ 0.78
COL11A1P12107 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A1P12107 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL11A1P12107 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.89■□□□□ 0.77
COL11A1P12107 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A1P12107 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A1P12107 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.89■□□□□ 0.77
COL11A1P12107 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL11A1P12107 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.89■□□□□ 0.77
COL11A1P12107 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL11A1P12107 AC046185.3-201ENST00000623228 1824 ntBASIC19.88■□□□□ 0.77
COL11A1P12107 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A1P12107 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A1P12107 AL513480.1-201ENST00000451731 511 ntBASIC19.88■□□□□ 0.77
COL11A1P12107 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.88■□□□□ 0.77
COL11A1P12107 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A1P12107 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
COL11A1P12107 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A1P12107 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.88■□□□□ 0.77
COL11A1P12107 AC092902.6-201ENST00000641783 218 ntBASIC19.88■□□□□ 0.77
COL11A1P12107 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL11A1P12107 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms