Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.27■□□□□ 0.2
THBS1P07996 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.27■□□□□ 0.2
THBS1P07996 COX5BP2-201ENST00000392354 334 ntBASIC16.27■□□□□ 0.2
THBS1P07996 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
THBS1P07996 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.27■□□□□ 0.2
THBS1P07996 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
THBS1P07996 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 AL121956.5-201ENST00000625261 221 ntBASIC16.27■□□□□ 0.2
THBS1P07996 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.27■□□□□ 0.2
THBS1P07996 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
THBS1P07996 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THBS1P07996 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
THBS1P07996 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
THBS1P07996 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
THBS1P07996 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.27■□□□□ 0.19
THBS1P07996 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
THBS1P07996 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.27■□□□□ 0.19
THBS1P07996 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THBS1P07996 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THBS1P07996 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
THBS1P07996 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THBS1P07996 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.27■□□□□ 0.19
THBS1P07996 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
THBS1P07996 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.26■□□□□ 0.19
THBS1P07996 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
THBS1P07996 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 LYSMD4-203ENST00000378904 2122 ntBASIC16.26■□□□□ 0.19
THBS1P07996 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 UPK3BP1-201ENST00000428678 509 ntBASIC16.26■□□□□ 0.19
THBS1P07996 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.26■□□□□ 0.19
THBS1P07996 FAM86EP-206ENST00000510506 987 ntBASIC16.26■□□□□ 0.19
THBS1P07996 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.26■□□□□ 0.19
THBS1P07996 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
THBS1P07996 AP000550.4-202ENST00000639755 178 ntBASIC16.26■□□□□ 0.19
THBS1P07996 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.26■□□□□ 0.19
THBS1P07996 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
THBS1P07996 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THBS1P07996 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
THBS1P07996 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
THBS1P07996 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
THBS1P07996 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
THBS1P07996 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
THBS1P07996 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
THBS1P07996 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
THBS1P07996 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 RN7SL606P-201ENST00000472779 293 ntBASIC16.25■□□□□ 0.19
THBS1P07996 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.25■□□□□ 0.19
THBS1P07996 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.25■□□□□ 0.19
THBS1P07996 AL353801.3-201ENST00000609898 542 ntBASIC16.25■□□□□ 0.19
THBS1P07996 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.25■□□□□ 0.19
THBS1P07996 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
THBS1P07996 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.25■□□□□ 0.19
THBS1P07996 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.25■□□□□ 0.19
THBS1P07996 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.25■□□□□ 0.19
THBS1P07996 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
THBS1P07996 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms