Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.41■□□□□ 0.06
SFTPBP07988 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SFTPBP07988 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SFTPBP07988 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SFTPBP07988 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SFTPBP07988 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.4■□□□□ 0.06
SFTPBP07988 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 KRT18P55-202ENST00000578578 1546 ntBASIC15.4■□□□□ 0.06
SFTPBP07988 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SFTPBP07988 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.4■□□□□ 0.06
SFTPBP07988 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.4■□□□□ 0.06
SFTPBP07988 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 AL359075.1-203ENST00000462729 1002 ntBASIC15.4■□□□□ 0.06
SFTPBP07988 LINC01238-205ENST00000567549 1107 ntBASIC15.4■□□□□ 0.06
SFTPBP07988 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SFTPBP07988 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SFTPBP07988 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SFTPBP07988 AC006116.8-202ENST00000587620 1550 ntBASIC15.4■□□□□ 0.06
SFTPBP07988 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SFTPBP07988 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SFTPBP07988 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SFTPBP07988 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.4■□□□□ 0.06
SFTPBP07988 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.06
SFTPBP07988 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.39■□□□□ 0.05
SFTPBP07988 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.39■□□□□ 0.05
SFTPBP07988 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SFTPBP07988 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.39■□□□□ 0.05
SFTPBP07988 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.39■□□□□ 0.05
SFTPBP07988 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.39■□□□□ 0.05
SFTPBP07988 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.39■□□□□ 0.05
SFTPBP07988 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.39■□□□□ 0.05
SFTPBP07988 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.39■□□□□ 0.05
SFTPBP07988 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SFTPBP07988 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SFTPBP07988 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.39■□□□□ 0.05
SFTPBP07988 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.39■□□□□ 0.05
SFTPBP07988 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SFTPBP07988 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SFTPBP07988 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SFTPBP07988 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.38■□□□□ 0.05
SFTPBP07988 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SFTPBP07988 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.38■□□□□ 0.05
SFTPBP07988 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SFTPBP07988 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.38■□□□□ 0.05
SFTPBP07988 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SFTPBP07988 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SFTPBP07988 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.38■□□□□ 0.05
SFTPBP07988 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SFTPBP07988 AP000523.1-201ENST00000398242 1049 ntBASIC15.38■□□□□ 0.05
SFTPBP07988 FAM8A6P-201ENST00000407496 1135 ntBASIC15.38■□□□□ 0.05
SFTPBP07988 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.38■□□□□ 0.05
SFTPBP07988 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SFTPBP07988 GCSHP2-201ENST00000560971 527 ntBASIC15.38■□□□□ 0.05
SFTPBP07988 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms