Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CSN3P07498 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CSN3P07498 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CSN3P07498 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
CSN3P07498 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.94□□□□□ -0.18
CSN3P07498 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.94□□□□□ -0.18
CSN3P07498 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.94□□□□□ -0.18
CSN3P07498 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.94□□□□□ -0.18
CSN3P07498 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.94□□□□□ -0.18
CSN3P07498 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.94□□□□□ -0.18
CSN3P07498 AC084018.2-201ENST00000613093 2607 ntBASIC13.94□□□□□ -0.18
CSN3P07498 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 AC126763.1-201ENST00000552015 2118 ntBASIC13.94□□□□□ -0.18
CSN3P07498 LINC00896-202ENST00000609602 2128 ntBASIC13.94□□□□□ -0.18
CSN3P07498 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CSN3P07498 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSN3P07498 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.93□□□□□ -0.18
CSN3P07498 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.93□□□□□ -0.18
CSN3P07498 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 AC134043.2-201ENST00000624206 2238 ntBASIC13.93□□□□□ -0.18
CSN3P07498 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.93□□□□□ -0.18
CSN3P07498 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.93□□□□□ -0.18
CSN3P07498 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.93□□□□□ -0.18
CSN3P07498 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSN3P07498 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSN3P07498 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
CSN3P07498 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.93□□□□□ -0.18
CSN3P07498 AC124067.4-201ENST00000519691 2379 ntBASIC13.93□□□□□ -0.18
CSN3P07498 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSN3P07498 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSN3P07498 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSN3P07498 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CSN3P07498 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.92□□□□□ -0.18
CSN3P07498 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSN3P07498 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.92□□□□□ -0.18
CSN3P07498 AL162741.1-201ENST00000565563 1558 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms