Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM3P06753 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TPM3P06753 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM3P06753 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TPM3P06753 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM3P06753 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TPM3P06753 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM3P06753 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.84■□□□□ 0.77
TPM3P06753 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.84■□□□□ 0.77
TPM3P06753 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM3P06753 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.84■□□□□ 0.77
TPM3P06753 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.84■□□□□ 0.77
TPM3P06753 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
TPM3P06753 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TPM3P06753 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.84■□□□□ 0.77
TPM3P06753 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 AL603756.1-201ENST00000606511 2163 ntBASIC19.84■□□□□ 0.77
TPM3P06753 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM3P06753 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM3P06753 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TPM3P06753 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM3P06753 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TPM3P06753 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.83■□□□□ 0.77
TPM3P06753 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.83■□□□□ 0.77
TPM3P06753 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.83■□□□□ 0.77
TPM3P06753 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM3P06753 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.83■□□□□ 0.77
TPM3P06753 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM3P06753 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM3P06753 AC008687.5-201ENST00000593746 558 ntBASIC19.83■□□□□ 0.77
TPM3P06753 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
TPM3P06753 FAM197Y4-202ENST00000622692 608 ntBASIC19.83■□□□□ 0.77
TPM3P06753 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM3P06753 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM3P06753 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TPM3P06753 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM3P06753 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TPM3P06753 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM3P06753 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.83■□□□□ 0.76
TPM3P06753 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.83■□□□□ 0.76
TPM3P06753 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.83■□□□□ 0.76
TPM3P06753 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 FLJ38576-201ENST00000623820 2459 ntBASIC19.82■□□□□ 0.76
TPM3P06753 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TPM3P06753 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 NUDT16P1-203ENST00000513809 620 ntBASIC19.82■□□□□ 0.76
TPM3P06753 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.82■□□□□ 0.76
TPM3P06753 WWOX-216ENST00000569818 525 ntBASIC19.82■□□□□ 0.76
TPM3P06753 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.82■□□□□ 0.76
TPM3P06753 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.82■□□□□ 0.76
TPM3P06753 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.82■□□□□ 0.76
TPM3P06753 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 AC092666.2-201ENST00000613287 246 ntBASIC19.82■□□□□ 0.76
TPM3P06753 LINC01451-201ENST00000623792 534 ntBASIC19.82■□□□□ 0.76
TPM3P06753 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TPM3P06753 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TPM3P06753 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TPM3P06753 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TPM3P06753 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TPM3P06753 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TPM3P06753 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.81■□□□□ 0.76
TPM3P06753 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms