Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT6AP02538 AL359075.1-203ENST00000462729 1002 ntBASIC17.15■□□□□ 0.34
KRT6AP02538 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.15■□□□□ 0.34
KRT6AP02538 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.15■□□□□ 0.34
KRT6AP02538 GPR32P1-201ENST00000601788 811 ntBASIC17.15■□□□□ 0.34
KRT6AP02538 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KRT6AP02538 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KRT6AP02538 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT6AP02538 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT6AP02538 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT6AP02538 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
KRT6AP02538 REXO1L11P-201ENST00000620964 1927 ntBASIC17.15■□□□□ 0.34
KRT6AP02538 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT6AP02538 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT6AP02538 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
KRT6AP02538 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
KRT6AP02538 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT6AP02538 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT6AP02538 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT6AP02538 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT6AP02538 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT6AP02538 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT6AP02538 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT6AP02538 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KRT6AP02538 BX276092.7-203ENST00000637198 1536 ntBASIC17.14■□□□□ 0.33
KRT6AP02538 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT6AP02538 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT6AP02538 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT6AP02538 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KRT6AP02538 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
KRT6AP02538 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 HBZP1-201ENST00000354915 429 ntBASIC17.13■□□□□ 0.33
KRT6AP02538 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 AK4P3-201ENST00000418260 669 ntBASIC17.13■□□□□ 0.33
KRT6AP02538 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT6AP02538 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 KRT18P57-201ENST00000443599 1254 ntBASIC17.13■□□□□ 0.33
KRT6AP02538 AC092647.4-201ENST00000457211 535 ntBASIC17.13■□□□□ 0.33
KRT6AP02538 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
KRT6AP02538 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT6AP02538 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT6AP02538 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
KRT6AP02538 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT6AP02538 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT6AP02538 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms