Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CD4P01730 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.44■□□□□ 0.7
CD4P01730 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.44■□□□□ 0.7
CD4P01730 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.44■□□□□ 0.7
CD4P01730 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 AC027612.4-201ENST00000605371 583 ntBASIC19.44■□□□□ 0.7
CD4P01730 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.44■□□□□ 0.7
CD4P01730 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CD4P01730 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.44■□□□□ 0.7
CD4P01730 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD4P01730 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CD4P01730 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.43■□□□□ 0.7
CD4P01730 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 FAM8A3P-201ENST00000427218 844 ntBASIC19.43■□□□□ 0.7
CD4P01730 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.43■□□□□ 0.7
CD4P01730 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 DUTP2-201ENST00000519164 463 ntBASIC19.43■□□□□ 0.7
CD4P01730 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.43■□□□□ 0.7
CD4P01730 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.43■□□□□ 0.7
CD4P01730 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
CD4P01730 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.43■□□□□ 0.7
CD4P01730 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD4P01730 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.43■□□□□ 0.7
CD4P01730 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.43■□□□□ 0.7
CD4P01730 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CD4P01730 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.42■□□□□ 0.7
CD4P01730 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CD4P01730 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CD4P01730 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.42■□□□□ 0.7
CD4P01730 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.42■□□□□ 0.7
CD4P01730 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.42■□□□□ 0.7
CD4P01730 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CD4P01730 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 PDPK2P-202ENST00000562415 1191 ntBASIC19.42■□□□□ 0.7
CD4P01730 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.42■□□□□ 0.7
CD4P01730 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.42■□□□□ 0.7
CD4P01730 AC092364.2-202ENST00000597012 1073 ntBASIC19.42■□□□□ 0.7
CD4P01730 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 AC010654.1-201ENST00000615722 808 ntBASIC19.42■□□□□ 0.7
CD4P01730 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD4P01730 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.42■□□□□ 0.7
CD4P01730 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CD4P01730 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.42■□□□□ 0.7
CD4P01730 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD4P01730 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD4P01730 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD4P01730 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD4P01730 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms