Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 PHGDH-209ENST00000641074 1780 ntBASIC19.6■□□□□ 0.73
CLSTN1O94985 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CLSTN1O94985 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 AL096828.2-201ENST00000567259 1965 ntBASIC19.59■□□□□ 0.73
CLSTN1O94985 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLSTN1O94985 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLSTN1O94985 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.59■□□□□ 0.73
CLSTN1O94985 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.59■□□□□ 0.73
CLSTN1O94985 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.59■□□□□ 0.73
CLSTN1O94985 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.59■□□□□ 0.73
CLSTN1O94985 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.59■□□□□ 0.73
CLSTN1O94985 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CLSTN1O94985 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 LINC00602-201ENST00000629776 2065 ntBASIC19.59■□□□□ 0.73
CLSTN1O94985 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.59■□□□□ 0.73
CLSTN1O94985 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLSTN1O94985 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
CLSTN1O94985 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLSTN1O94985 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLSTN1O94985 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 LINC00896-202ENST00000609602 2128 ntBASIC19.58■□□□□ 0.73
CLSTN1O94985 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
CLSTN1O94985 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.58■□□□□ 0.73
CLSTN1O94985 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLSTN1O94985 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CLSTN1O94985 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.58■□□□□ 0.72
CLSTN1O94985 AL031133.1-201ENST00000406807 723 ntBASIC19.58■□□□□ 0.72
CLSTN1O94985 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLSTN1O94985 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
CLSTN1O94985 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.58■□□□□ 0.72
CLSTN1O94985 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.58■□□□□ 0.72
CLSTN1O94985 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLSTN1O94985 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLSTN1O94985 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.58■□□□□ 0.72
CLSTN1O94985 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.58■□□□□ 0.72
CLSTN1O94985 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLSTN1O94985 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CLSTN1O94985 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLSTN1O94985 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLSTN1O94985 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.57■□□□□ 0.72
CLSTN1O94985 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.57■□□□□ 0.72
CLSTN1O94985 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.57■□□□□ 0.72
CLSTN1O94985 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.57■□□□□ 0.72
CLSTN1O94985 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.57■□□□□ 0.72
CLSTN1O94985 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.57■□□□□ 0.72
CLSTN1O94985 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLSTN1O94985 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms