Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC096734.2-201ENST00000562054 433 ntBASIC16.57■□□□□ 0.24
RRP8O43159 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RRP8O43159 AC007064.4-201ENST00000637740 555 ntBASIC16.57■□□□□ 0.24
RRP8O43159 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
RRP8O43159 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RRP8O43159 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RRP8O43159 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RRP8O43159 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RRP8O43159 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
RRP8O43159 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.56■□□□□ 0.24
RRP8O43159 KRT19P2-202ENST00000557173 1012 ntBASIC16.56■□□□□ 0.24
RRP8O43159 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.56■□□□□ 0.24
RRP8O43159 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.56■□□□□ 0.24
RRP8O43159 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RRP8O43159 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RRP8O43159 AL138781.2-201ENST00000617896 1843 ntBASIC16.56■□□□□ 0.24
RRP8O43159 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RRP8O43159 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RRP8O43159 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.55■□□□□ 0.24
RRP8O43159 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 GK-202ENST00000378941 458 ntTSL 3 BASIC16.55■□□□□ 0.24
RRP8O43159 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.55■□□□□ 0.24
RRP8O43159 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.55■□□□□ 0.24
RRP8O43159 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.55■□□□□ 0.24
RRP8O43159 AJ011932.1-201ENST00000621707 465 ntBASIC16.55■□□□□ 0.24
RRP8O43159 AL513210.1-201ENST00000629608 234 ntBASIC16.55■□□□□ 0.24
RRP8O43159 AF228730.6-201ENST00000641497 218 ntBASIC16.55■□□□□ 0.24
RRP8O43159 AC084121.3-201ENST00000641716 218 ntBASIC16.55■□□□□ 0.24
RRP8O43159 AC105233.6-201ENST00000642093 218 ntBASIC16.55■□□□□ 0.24
RRP8O43159 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RRP8O43159 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RRP8O43159 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.55■□□□□ 0.24
RRP8O43159 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.54■□□□□ 0.24
RRP8O43159 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
RRP8O43159 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RRP8O43159 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RRP8O43159 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.54■□□□□ 0.24
RRP8O43159 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
RRP8O43159 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 AC067863.1-201ENST00000494933 530 ntBASIC16.54■□□□□ 0.24
RRP8O43159 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.54■□□□□ 0.24
RRP8O43159 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
RRP8O43159 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.54■□□□□ 0.24
RRP8O43159 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms