Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RTL8CO15255 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTL8CO15255 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RTL8CO15255 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.75□□□□□ -0.53
RTL8CO15255 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTL8CO15255 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
RTL8CO15255 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RTL8CO15255 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.75□□□□□ -0.53
RTL8CO15255 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.75□□□□□ -0.53
RTL8CO15255 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTL8CO15255 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RTL8CO15255 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTL8CO15255 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC11.75□□□□□ -0.53
RTL8CO15255 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTL8CO15255 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTL8CO15255 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RTL8CO15255 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.74□□□□□ -0.53
RTL8CO15255 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.74□□□□□ -0.53
RTL8CO15255 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 AL020989.1-201ENST00000422979 469 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 AC103564.2-201ENST00000432853 1299 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.74□□□□□ -0.53
RTL8CO15255 PRSS29P-201ENST00000440800 595 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.74□□□□□ -0.53
RTL8CO15255 AL031432.2-201ENST00000566714 459 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.74□□□□□ -0.53
RTL8CO15255 AL928711.1-201ENST00000570165 459 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.74□□□□□ -0.53
RTL8CO15255 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.74□□□□□ -0.53
RTL8CO15255 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.74□□□□□ -0.53
RTL8CO15255 AC008667.4-201ENST00000607370 168 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.74□□□□□ -0.53
RTL8CO15255 AC093028.1-201ENST00000622998 982 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 AC004790.2-201ENST00000623588 572 ntBASIC11.74□□□□□ -0.53
RTL8CO15255 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.74□□□□□ -0.53
RTL8CO15255 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
RTL8CO15255 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RTL8CO15255 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RTL8CO15255 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RTL8CO15255 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.74□□□□□ -0.53
RTL8CO15255 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
RTL8CO15255 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RTL8CO15255 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RTL8CO15255 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.73□□□□□ -0.53
RTL8CO15255 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RTL8CO15255 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 GMCL1P1-201ENST00000463439 1581 ntBASIC11.73□□□□□ -0.53
RTL8CO15255 RPS15P9-201ENST00000494093 319 ntBASIC11.73□□□□□ -0.53
RTL8CO15255 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.73□□□□□ -0.53
RTL8CO15255 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
RTL8CO15255 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RTL8CO15255 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.73□□□□□ -0.53
RTL8CO15255 SPCS2P1-201ENST00000561636 679 ntBASIC11.73□□□□□ -0.53
RTL8CO15255 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.73□□□□□ -0.53
RTL8CO15255 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.73□□□□□ -0.53
RTL8CO15255 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
RTL8CO15255 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms