Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2A1O14983 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP2A1O14983 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2A1O14983 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP2A1O14983 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
ATP2A1O14983 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP2A1O14983 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP2A1O14983 UPF3AP3-201ENST00000420996 769 ntBASIC20.17■□□□□ 0.82
ATP2A1O14983 AC002558.1-201ENST00000488906 803 ntBASIC20.17■□□□□ 0.82
ATP2A1O14983 AC108751.1-201ENST00000490852 363 ntBASIC20.17■□□□□ 0.82
ATP2A1O14983 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP2A1O14983 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATP2A1O14983 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP2A1O14983 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2A1O14983 AC006504.4-201ENST00000592118 1568 ntBASIC20.17■□□□□ 0.82
ATP2A1O14983 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATP2A1O14983 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2A1O14983 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ATP2A1O14983 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ATP2A1O14983 YBX2P1-201ENST00000394192 760 ntBASIC20.16■□□□□ 0.82
ATP2A1O14983 RPSAP43-201ENST00000402237 625 ntBASIC20.16■□□□□ 0.82
ATP2A1O14983 ELK2BP-201ENST00000415014 1224 ntBASIC20.16■□□□□ 0.82
ATP2A1O14983 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2A1O14983 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2A1O14983 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2A1O14983 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2A1O14983 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
ATP2A1O14983 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATP2A1O14983 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP2A1O14983 GPX1P2-201ENST00000429271 606 ntBASIC20.15■□□□□ 0.82
ATP2A1O14983 AC007967.2-201ENST00000432613 625 ntBASIC20.15■□□□□ 0.82
ATP2A1O14983 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP2A1O14983 AC064836.3-201ENST00000607928 673 ntBASIC20.15■□□□□ 0.82
ATP2A1O14983 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms