Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 RPS2P35-201ENST00000443417 897 ntBASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 MIR3181-201ENST00000578512 73 ntBASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CHKB-CPT1BH3BT56 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 LYSMD4-203ENST00000378904 2122 ntBASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 MIR639-201ENST00000384974 98 ntBASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 HES6-204ENST00000409182 863 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ABHD17AP4-201ENST00000411545 909 ntBASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 AC053503.5-201ENST00000601508 636 ntBASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms