Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 AL118508.1-201ENST00000613502 2345 ntBASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 HLA-F-220ENST00000434407 884 ntBASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 KRT18P48-201ENST00000434763 852 ntBASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 LINC01311-201ENST00000565162 1445 ntBASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV9S1A1TA0A576 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 AGGF1P2-201ENST00000426656 2106 ntBASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 AC116353.5-201ENST00000638148 1699 ntBASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 SPDYE15P-201ENST00000424157 909 ntBASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 AC145285.6-201ENST00000604632 637 ntBASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
TCRBV9S1A1TA0A576 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 AL441883.1-201ENST00000566170 1045 ntBASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV9S1A1TA0A576 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TCRBV9S1A1TA0A576 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms