Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
LINC01558Q9Y6Z2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 AC023157.3-201ENST00000619086 2088 ntBASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 POU5F1P4-201ENST00000413175 1085 ntBASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PGM5P4-201ENST00000421970 445 ntBASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC9.13□□□□□ -0.95
LINC01558Q9Y6Z2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 AC079781.5-202ENST00000641784 3743 ntBASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01558Q9Y6Z2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms