Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTCH2Q9Y6C5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 AC005237.2-201ENST00000434368 219 ntBASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 LINC02560-201ENST00000596379 459 ntBASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 AC008761.3-201ENST00000624803 892 ntBASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 AC097637.2-201ENST00000624096 1997 ntBASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
PTCH2Q9Y6C5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 AC026120.1-201ENST00000611536 926 ntBASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCH2Q9Y6C5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTCH2Q9Y6C5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 OR8S1-201ENST00000310194 1080 ntBASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 GMCL1P1-201ENST00000463439 1581 ntBASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTCH2Q9Y6C5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 TUBB3P1-201ENST00000405796 1332 ntBASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCH2Q9Y6C5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms