Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 AC125634.1-201ENST00000438758 1403 ntBASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL4A3BPQ9Y5P4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A3BPQ9Y5P4 TP73-AS1-210ENST00000637775 1455 ntBASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 AC009533.2-201ENST00000543664 586 ntBASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 MIR5100-201ENST00000579544 119 ntBASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A3BPQ9Y5P4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 RCN1P2-201ENST00000398357 915 ntBASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 AL591684.3-201ENST00000605187 298 ntBASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A3BPQ9Y5P4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms