Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AP002982.1-201ENST00000492365 877 ntBASIC16.76■□□□□ 0.27
AP4S1Q9Y587 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AL138781.1-201ENST00000566567 1274 ntBASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AC026271.3-201ENST00000571884 352 ntBASIC16.76■□□□□ 0.27
AP4S1Q9Y587 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AL353708.3-201ENST00000610272 989 ntBASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AL023875.1-201ENST00000640777 796 ntBASIC16.76■□□□□ 0.27
AP4S1Q9Y587 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4S1Q9Y587 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AC005915.1-201ENST00000624912 2018 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 UNC93B5-201ENST00000530315 699 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AC009065.1-201ENST00000564055 1225 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AC008403.3-201ENST00000598924 454 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AC069544.1-201ENST00000609399 999 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AL031985.4-201ENST00000642138 673 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AC016396.2-201ENST00000562575 1417 ntBASIC16.75■□□□□ 0.27
AP4S1Q9Y587 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4S1Q9Y587 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 KRT8P7-201ENST00000533003 1432 ntBASIC16.74■□□□□ 0.27
AP4S1Q9Y587 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 AC239809.2-201ENST00000415381 517 ntBASIC16.74■□□□□ 0.27
AP4S1Q9Y587 KRT17P3-201ENST00000420566 1262 ntBASIC16.74■□□□□ 0.27
AP4S1Q9Y587 NCF1B-203ENST00000435988 1254 ntBASIC16.74■□□□□ 0.27
AP4S1Q9Y587 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 AC116407.2-201ENST00000613639 860 ntBASIC16.74■□□□□ 0.27
AP4S1Q9Y587 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4S1Q9Y587 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
AP4S1Q9Y587 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms