Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERGIC3Q9Y282 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 AC007950.2-201ENST00000615045 2347 ntBASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERGIC3Q9Y282 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AL023284.2-201ENST00000405850 579 ntBASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 NIFKP9-201ENST00000419265 221 ntBASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AL138781.1-201ENST00000566567 1274 ntBASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 MTDHP1-201ENST00000605323 784 ntBASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERGIC3Q9Y282 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERGIC3Q9Y282 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms