Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 AP005117.1-201ENST00000584346 1413 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20■□□□□ 0.79
HDAC6Q9UBN7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC6Q9UBN7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 RPL13AP23-201ENST00000480739 586 ntBASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 KRT18P58-201ENST00000527480 1120 ntBASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC6Q9UBN7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 ABCD1P5-201ENST00000445663 754 ntBASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 POLD2P1-201ENST00000511220 997 ntBASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 AC021087.4-201ENST00000563761 564 ntBASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 AC116407.3-201ENST00000623905 1129 ntBASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HDAC6Q9UBN7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms