Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL139327.4-201ENST00000612362 153 ntBASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
BLOC1S4Q9NUP1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BLOC1S4Q9NUP1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BLOC1S4Q9NUP1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BLOC1S4Q9NUP1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
BLOC1S4Q9NUP1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BLOC1S4Q9NUP1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 AL353593.2-201ENST00000602529 1483 ntBASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 AC103564.2-201ENST00000432853 1299 ntBASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 AC099336.1-202ENST00000602961 463 ntBASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 AC114341.1-201ENST00000618070 349 ntBASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 AD001527.2-201ENST00000622994 785 ntBASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BLOC1S4Q9NUP1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.62■□□□□ 0.73
BLOC1S4Q9NUP1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms