Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 AC117947.1-201ENST00000427448 529 ntBASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 KRT18P48-201ENST00000434763 852 ntBASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 AC026271.3-201ENST00000571884 352 ntBASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCM2LQ9NUG4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 AL024508.2-201ENST00000607749 1894 ntBASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 MESTP1-201ENST00000404287 994 ntBASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 AP005242.2-201ENST00000580065 1175 ntBASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.85■□□□□ 0.29
CCM2LQ9NUG4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms