Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC42SE2Q9NRR3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 AL157888.1-201ENST00000631930 593 ntBASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 KRT89P-201ENST00000620027 1478 ntBASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC42SE2Q9NRR3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 HMGA1P5-201ENST00000412453 271 ntBASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AC024563.2-201ENST00000603282 481 ntBASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CDC42SE2Q9NRR3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC42SE2Q9NRR3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms